Result : O32160
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein YurS |
| NCBI Accession ID | AL009126.3 |
| Organism | Bacillus subtilis (strain 168) |
| Left | 3354212 |
| Right | 3354487 |
| Strand | + |
| Nucleotide Sequence | ATGAACGAAAACATCATTCCTCTTAACAGACATACTCAAGAGATACCCACTACTGAATCTGTTATCAAAAACAGCGGCAACTCAGAGGTCCATATCGACATTCACATTGATACAATGCCAATTGCTTTTGCTATATTATGCTCTGCATTAGCCGCAAAGCAGATGACAAAAGAGGAATTCGATATGGCTTATACTCAATTGCGAGAGATGAACAGAGAAAATAACAGCAGATCATCTGTAAAGCAAATTATCAATCAAGAGACAGAAGAAGAGTAA |
| Sequence | MNENIIPLNRHTQEIPTTESVIKNSGNSEVHIDIHIDTMPIAFAILCSALAAKQMTKEEFDMAYTQLREMNRENNSRSSVKQIINQETEEE |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 9384377 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | O32160 |
| ORF Length (Amino Acid) | 91 |
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| Conservation Analysis |
No. of Species: 6
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3354212 | 3354487 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 2 | 3157723 | 3157995 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 3 | 2909833 | 2910105 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 4 | 3162099 | 3162371 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 5 | 3221209 | 3221481 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 6 | 3139951 | 3140226 | + | NZ_CP051464.1 | Bacillus mojavensis |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000964.3
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01547.27 | 0.83 | 5 | 3184 | opposite-strand | Bacterial extracellular solute-binding protein |
| 2 | PF13416.8 | 0.83 | 5 | 3184 | opposite-strand | Bacterial extracellular solute-binding protein |
| 3 | PF01380.24 | 0.83 | 5 | 2117 | opposite-strand | SIS domain |
| 4 | PF01541.26 | 1.0 | 6 | 1528.5 | opposite-strand | GIY-YIG catalytic domain |
| 5 | PF01266.26 | 1.0 | 6 | 308.0 | opposite-strand | FAD dependent oxidoreductase |
| 6 | PF01458.19 | 0.67 | 4 | 2292.5 | opposite-strand | SUF system FeS cluster assembly, SufBD |
| 7 | PF01592.18 | 0.67 | 4 | 2645.0 | opposite-strand | NifU-like N terminal domain |
| 8 | PF00266.21 | 0.67 | 4 | 3078.0 | opposite-strand | Aminotransferase class-V |
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