Protein Information |
Information Type | Description |
---|---|
Protein name | SPbeta prophage-derived uncharacterized protein YopF |
NCBI Accession ID | AL009126.3 |
Organism | Bacillus subtilis (strain 168) |
Left | 2212026 |
Right | 2212241 |
Strand | - |
Nucleotide Sequence | ATGCCTTTGATTGATTATTTTTATGTACTGCAGTTTGAAAACAAGGAATACTTTAAAGCATTTAAATTAGATGAGAGTGGTTATTTGACATCTAGCGACCTCCATGAAGCTTCTAAAATACATAATATGTTAGAAGTCATCGAGGTAGCAAGTGAGCTTAAAACGAAGTGTAATGTGCAATGTGAGGTAAGGGAAATTCAAGTCGTAAAGCGTTAG |
Sequence | MPLIDYFYVLQFENKEYFKAFKLDESGYLTSSDLHEASKIHNMLEVIEVASELKTKCNVQCEVREIQVVKR |
Source of smORF | Swiss-Prot |
Function | |
Pubmed ID | 9384377 |
Domain | |
Functional Category | Others |
Uniprot ID | O31932 |
ORF Length (Amino Acid) | 71 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 2212026 | 2212241 | - | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
2 | 1787378 | 1787593 | + | NZ_CP048852.1 | Bacillus tequilensis |
3 | 4057172 | 4057396 | + | NZ_CP029364.1 | Bacillus halotolerans |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF17094.7 | 0.67 | 2 | 975.5 | same-strand | Uncharacterised protein family (UPF0715) |