* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000964.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF13238.8
|
1.0
|
2
|
629.0
|
same-strand
|
AAA domain
|
2
|
PF09629.12
|
1.0
|
2
|
266.0
|
same-strand
|
YorP protein
|
3
|
PF06725.13
|
1.0
|
2
|
118.0
|
same-strand
|
3D domain
|
4
|
PF01368.22
|
1.0
|
2
|
3980.5
|
same-strand
|
DHH family
|
5
|
PF17768.3
|
1.0
|
2
|
3980.5
|
same-strand
|
RecJ OB domain
|
6
|
PF03796.17
|
1.0
|
2
|
6811.0
|
same-strand
|
DnaB-like helicase C terminal domain
|
++ More..