ProsmORF-pred
Result : A2BSA6
Protein Information
Information Type Description
Protein name 30S ribosomal protein S14
NCBI Accession ID CP000551.1
Organism Prochlorococcus marinus (strain AS9601)
Left 1150499
Right 1150801
Strand +
Nucleotide Sequence ATGGCTAAAAAGTCCATGATTGCGAGAGAAGTTAAACGCAAAAAACTTGTGAAGAAATATTCTGCAAAAAGAAAAGCATTATTAGATGAATTTAATGCCGCAAAAGATCCTATGGAAAGATTAGAAATTCATAGAAAGATTCAAGGTCTGCCAAGGAACTCTGCACCAAATAGAGTAAGAAATAGATGTTGGGCAACTGGTAAACCTAGAGGAGTATATAGAGATTTTGGTCTTTGCAGGAATCAGTTAAGACAAAGAGCTCATAACGGTGAACTCCCCGGGGTAGTAAAATCAAGTTGGTAG
Sequence MAKKSMIAREVKRKKLVKKYSAKRKALLDEFNAAKDPMERLEIHRKIQGLPRNSAPNRVRNRCWATGKPRGVYRDFGLCRNQLRQRAHNGELPGVVKSSW
Source of smORF Swiss-Prot
Function Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. {ECO:0000255|HAMAP-Rule:MF_00537}.
Pubmed ID 18159947
Domain CDD:412331
Functional Category Ribosomal_protein
Uniprot ID A2BSA6
ORF Length (Amino Acid) 100
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 552
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1205795 1206094 + NC_005042.1 Prochlorococcus marinus subsp. marinus str. CCMP1375
2 1429229 1429531 + NC_019675.1 Cyanobium gracile PCC 6307
3 3444429 3444731 + NZ_CP047242.1 Trichormus variabilis 0441
4 1787742 1788044 + NC_019771.1 Anabaena cylindrica PCC 7122
5 2812394 2812696 - NC_014248.1 'Nostoc azollae' 0708
6 4019863 4020165 - NZ_CP024785.1 Nostoc flagelliforme CCNUN1
7 3159194 3159496 - NZ_CP060822.1 Cylindrospermopsis curvispora GIHE-G1
8 3020467 3020769 - NZ_CP031941.1 Nostoc sphaeroides
9 1534293 1534595 + NZ_CP054698.1 Nostoc edaphicum CCNP1411
10 5072584 5072886 + NC_010628.1 Nostoc punctiforme PCC 73102
11 2553470 2553772 - NC_019693.1 Oscillatoria acuminata PCC 6304
12 2035708 2036010 + NZ_AP014638.1 Leptolyngbya boryana IAM M-101
13 5309888 5310190 + NZ_CP021983.2 Halomicronema hongdechloris C2206
14 250245 250547 - NC_019753.1 Crinalium epipsammum PCC 9333
15 5865693 5865995 - NC_019751.1 Calothrix sp. PCC 6303
16 1223157 1223459 + NC_019748.1 Stanieria cyanosphaera PCC 7437
17 1662005 1662307 - NC_019695.1 Chroococcidiopsis thermalis PCC 7203
18 49818 50120 + NC_019776.1 Cyanobacterium aponinum PCC 10605
19 1785351 1785653 - NZ_AP018202.1 Thermostichus vulcanus NIES-2134
20 1906838 1907140 - NC_004113.1 Thermosynechococcus vestitus BP-1
21 245133 245435 + NZ_CP018092.1 Synechococcus lividus PCC 6715
22 1388924 1389226 - NC_019729.1 Oscillatoria nigro-viridis PCC 7112
23 4112826 4113128 + NC_009925.1 Acaryochloris marina MBIC11017
24 4901395 4901697 + NC_010296.1 Microcystis aeruginosa NIES-843
25 3136436 3136738 + NC_011729.1 Gloeothece citriformis PCC 7424
26 2102644 2102946 + NC_019689.1 Pleurocapsa sp. PCC 7327
27 2466060 2466362 - NC_014501.1 Gloeothece verrucosa PCC 7822
28 3573819 3574121 + NC_019780.1 Dactylococcopsis salina PCC 8305
29 2760457 2760759 - NZ_CP042326.1 Euhalothece natronophila Z-M001
30 436434 436739 + NZ_AP018558.1 Hydrogenophilus thermoluteolus
31 2454267 2454572 + NZ_CP059467.1 Aromatoleum bremense
32 2267285 2267590 + NC_006513.1 Aromatoleum aromaticum EbN1
33 2561406 2561711 - NZ_CP010554.1 Rugosibacter aromaticivorans
34 2082246 2082551 - NZ_CP059560.1 Aromatoleum petrolei
35 489024 489329 + NZ_CP029331.1 Thauera hydrothermalis
36 428207 428512 + NZ_AP018721.1 Sulfuritortus calidifontis
37 524181 524486 + NC_008340.1 Alkalilimnicola ehrlichii MLHE-1
38 841540 841845 + NC_010995.1 Cellvibrio japonicus Ueda107
39 688095 688400 + NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
40 56488 56793 - NZ_CP018787.1 Oxalobacter formigenes
41 3086379 3086684 - NZ_CP028901.1 Algicoccus marinus
42 3142985 3143290 - NZ_CP032134.1 Acinetobacter chinensis
43 491237 491542 - NZ_CP012808.1 Acinetobacter equi
44 2655583 2655888 - NZ_CP030241.1 Moraxella bovis
45 3159464 3159769 + NZ_CP011412.1 Sedimenticola thiotaurini
46 2257638 2257943 + NZ_CP019343.1 Oceanicoccus sagamiensis
47 4147148 4147453 - NZ_AP014630.1 Acinetobacter guillouiae
48 3083004 3083309 - NZ_CP022579.1 Oryzomicrobium terrae
49 2478334 2478639 + NZ_CP040105.1 Acinetobacter nosocomialis M2
50 2725148 2725453 - NC_016603.1 Acinetobacter pittii PHEA-2
51 448795 449100 + NZ_CP053391.1 Acinetobacter lactucae
52 2905855 2906160 - NZ_CP028339.1 Thauera aromatica K172
53 2395668 2395973 + NZ_CP070518.1 Acinetobacter calcoaceticus
54 477619 477924 + NZ_CP049801.1 Acinetobacter shaoyimingii
55 1700137 1700442 - NZ_CP011381.2 Moraxella bovoculi
56 1796630 1796935 - NZ_CP011158.1 Moraxella ovis
57 409752 410057 + NZ_CP030880.1 Acinetobacter haemolyticus
58 1126847 1127152 + NZ_CP041046.1 Luteibacter pinisoli
59 381975 382280 + NZ_CP065728.1 Moraxella nonliquefaciens
60 456277 456582 + NZ_CP024632.1 Acinetobacter junii
61 443778 444083 + NZ_CP015121.1 Acinetobacter baumannii
62 477996 478301 + NZ_CP065820.1 Acinetobacter seifertii
63 2456293 2456598 - NZ_CP014646.1 Thauera humireducens
64 460180 460485 + NC_014259.1 Acinetobacter oleivorans DR1
65 834505 834810 + NZ_CP035467.1 Methylotuvimicrobium buryatense
66 421089 421394 + NZ_CP049916.1 Acinetobacter lanii
67 1264867 1265172 - NZ_LR884459.1 Psychrobacter arenosus
68 3857281 3857586 - NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
69 981902 982207 - NZ_CP048812.1 Halomonas socia
70 255625 255930 - NZ_CP031124.1 Ephemeroptericola cinctiostellae
71 413588 413893 + NZ_CP044483.1 Acinetobacter schindleri
72 3822730 3823035 - NZ_CP016210.1 Azoarcus olearius
73 507048 507353 + NZ_CP014544.1 Zhongshania aliphaticivorans
74 374719 375024 + NZ_CP013106.1 Halomonas huangheensis
75 2011327 2011632 - NC_018868.3 Simiduia agarivorans SA1 = DSM 21679
76 1540235 1540540 - NZ_CP047165.1 Pelistega ratti
77 1546078 1546383 - NC_016043.1 Taylorella asinigenitalis MCE3
78 703868 704173 + NZ_CP014945.1 Psychrobacter alimentarius
79 485752 486057 + NC_007963.1 Chromohalobacter salexigens DSM 3043
80 550358 550663 + NZ_CP029397.2 Acinetobacter defluvii
81 290716 291021 + NC_014532.2 Halomonas elongata DSM 2581
82 473726 474031 + NZ_CP016895.1 Acinetobacter larvae
83 3930149 3930454 - NZ_CP065435.1 Halomonas sp. SS10-MC5
84 3637574 3637879 - NZ_CP021435.1 Halomonas beimenensis
85 1898077 1898382 + NZ_CP018839.1 Thauera chlorobenzoica
86 195072 195377 - NZ_CP071766.1 Acinetobacter towneri
87 4436302 4436607 + NZ_CP019038.1 Massilia putida
88 3128403 3128708 - NC_005966.1 Acinetobacter baylyi ADP1
89 385879 386184 - NZ_AP022345.1 Fluviibacter phosphoraccumulans
90 211481 211786 + NZ_AP022843.1 Halomonas hydrothermalis
91 916957 917262 - NZ_CP022278.1 Neisseria chenwenguii
92 5414859 5415164 + NZ_CP040017.1 Massilia umbonata
93 6462192 6462497 - NZ_CP036401.1 Massilia albidiflava
94 2216262 2216567 + NZ_CP020046.1 Thiomonas intermedia
95 4268584 4268889 + NZ_CP046904.1 Massilia flava
96 1250998 1251303 + NC_007912.1 Saccharophagus degradans 2-40
97 4411742 4412047 - NZ_CP060092.1 Teredinibacter purpureus
98 777104 777409 + NC_013959.1 Sideroxydans lithotrophicus ES-1
99 3536911 3537216 + NZ_CP041970.1 Acinetobacter dispersus
100 1103007 1103312 + NZ_CP031699.1 Neisseria animalis
101 1577227 1577532 - NZ_CP021060.1 Taylorella equigenitalis
102 1201788 1202093 + NZ_CP059565.1 Neisseria wadsworthii
103 4505087 4505392 - NZ_CP003915.1 Advenella mimigardefordensis DPN7
104 1856621 1856926 - NZ_CP041730.1 Chitinimonas arctica
105 1538527 1538832 + NZ_CP004372.1 Roseibacterium elongatum DSM 19469
106 2104648 2104953 - NZ_CP059567.1 Neisseria shayeganii
107 330534 330839 + NZ_AP018786.1 Sutterella megalosphaeroides
108 499596 499901 + NZ_CP035934.2 Acinetobacter cumulans
109 156013 156318 - NZ_LR134343.1 Moraxella cuniculi
110 515100 515405 + NZ_AP018738.1 Ferriphaselus amnicola
111 1554143 1554448 - NC_014147.1 Moraxella catarrhalis BBH18
112 3252847 3253152 - NZ_LR778301.1 Denitratisoma oestradiolicum
113 1969285 1969590 + NZ_CP018139.1 Halomonas aestuarii
114 1184945 1185250 + NZ_CP072268.1 Xanthomonas euvesicatoria pv. alfalfae
115 217050 217355 + NZ_CP048602.1 Halomonas piezotolerans
116 210942 211247 + NZ_CP065135.1 Halomonas venusta
117 139750 140055 + NZ_CP011930.1 Herbaspirillum seropedicae
118 179022 179327 + NZ_CP037993.1 Herbaspirillum huttiense
119 3026321 3026626 - NZ_CP043420.1 Kushneria phosphatilytica
120 921055 921360 - NC_008789.1 Halorhodospira halophila SL1
121 2786711 2787016 + NZ_LT671418.1 Herminiimonas arsenitoxidans
122 134221 134526 + NZ_CP014226.1 Halomonas chromatireducens
123 157101 157406 + NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
124 2529935 2530237 - NC_014033.1 Prevotella ruminicola 23
125 331627 331932 + NZ_CP013235.1 Collimonas arenae
126 444041 444346 + NZ_CP013236.1 Collimonas pratensis
127 718168 718473 + NZ_CP013232.1 Collimonas fungivorans
128 1151529 1151834 + NZ_LR134313.1 Neisseria canis
129 569296 569601 + NZ_AP022853.1 Sulfurimicrobium lacus
130 3259004 3259303 - NZ_CP069440.1 Phocaeicola coprophilus
131 1997650 1997955 + NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
132 1173138 1173443 - NZ_CP023559.1 Salinicola tamaricis
133 644610 644915 + NC_022357.1 Sulfuricella denitrificans skB26
134 1788487 1788792 - NZ_CP039887.1 Neisseria subflava
135 1958349 1958654 + NZ_CP039886.1 Neisseria flavescens
136 1675035 1675340 + NZ_CP031252.1 Neisseria elongata
137 1954682 1954987 - NZ_CP072524.1 Neisseria sicca
138 2689331 2689636 + NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
139 1697194 1697499 + NZ_LS483369.1 Neisseria cinerea
140 518029 518334 - NZ_CP042382.1 Pistricoccus aurantiacus
141 3410440 3410745 - NZ_CP018845.1 Herbaspirillum robiniae
142 4159541 4159846 - NC_017964.1 Advenella kashmirensis WT001
143 551967 552272 + NZ_CP043929.1 Methylomonas rhizoryzae
144 2684127 2684432 + NZ_CP060414.1 Neisseria musculi
145 1268663 1268968 + NZ_CP046027.1 Neisseria brasiliensis
146 2911387 2911692 - NC_017857.3 Methylophaga nitratireducenticrescens
147 2330945 2331250 - NZ_CP031222.1 Aquirhabdus parva
148 5203367 5203672 - NC_010170.1 Bordetella petrii
149 1908368 1908673 - NZ_CP031253.1 Neisseria lactamica
150 4337523 4337828 - NC_020911.1 Octadecabacter antarcticus 307
151 4220767 4221072 - NC_015572.1 Methylomonas methanica MC09
152 3688836 3689141 - NZ_CP011451.1 Nitrosomonas communis
153 2124833 2125138 - NZ_CP012418.1 Kangiella sediminilitoris
154 602106 602411 + NC_007204.1 Psychrobacter arcticus 273-4
155 599314 599619 + NC_007969.1 Psychrobacter cryohalolentis K5
156 2360423 2360728 - NZ_CP045650.1 Acinetobacter wanghuae
157 2322913 2323218 - NZ_CP031700.1 Neisseria zalophi
158 2829085 2829387 - NZ_LR134384.1 Prevotella oris
159 1925359 1925664 - NZ_LR134516.1 Neisseria animaloris
160 1095008 1095307 - NC_009614.1 Phocaeicola vulgatus ATCC 8482
161 1099470 1099769 - NZ_LR699004.1 Phocaeicola dorei
162 952427 952732 + NZ_CP024608.1 Massilia violaceinigra
163 259892 260197 + NZ_CP060084.1 Teredinibacter haidensis
164 3373981 3374286 - NZ_CP016022.1 Ralstonia insidiosa
165 2116116 2116421 - NZ_CP010975.1 Kangiella geojedonensis
166 1155461 1155766 + NZ_CP028127.1 Xanthomonas vasicola pv. vasculorum
167 4172832 4173137 - NZ_CP027860.1 Ahniella affigens
168 3841739 3842044 - NZ_CP054301.1 Marinomonas primoryensis
169 2494757 2495062 - NZ_LT906434.1 Neisseria zoodegmatis
170 448367 448669 + NC_014370.1 Prevotella melaninogenica ATCC 25845
171 1146325 1146627 - NZ_CP012074.1 Prevotella fusca JCM 17724
172 438541 438843 + NZ_CP023863.1 Prevotella jejuni
173 257641 257946 + NC_015276.1 Marinomonas mediterranea MMB-1
174 883886 884191 - NZ_CP012678.1 Psychrobacter urativorans
175 69918 70220 - NZ_CP024727.1 Prevotella intermedia
176 900465 900770 + NZ_CP007810.1 Xanthomonas oryzae pv. oryzicola
177 899872 900177 + NZ_CP033326.1 Xanthomonas cucurbitae
178 3772599 3772904 - NZ_CP058243.1 Xanthomonas campestris pv. raphani
179 4111754 4112059 + NZ_CP018725.1 Xanthomonas vesicatoria ATCC 35937
180 1151798 1152103 + NZ_CP048044.1 Xanthomonas citri
181 2409176 2409481 - NZ_CP016878.1 Xanthomonas hortorum
182 2444620 2444925 - NZ_LR134302.1 Achromobacter spanius
183 6331900 6332205 - NZ_CP038034.1 Achromobacter insolitus
184 4900646 4900951 - NZ_CP053986.1 Achromobacter denitrificans
185 3278710 3279015 - NC_018518.1 Bordetella pertussis 18323
186 3132159 3132464 - NZ_LT853882.1 Xanthomonas fragariae
187 4127321 4127626 + NZ_AP019378.1 Bordetella parapertussis
188 5128087 5128392 - NZ_LR134326.1 Bordetella bronchiseptica
189 365466 365771 + NZ_AP018722.1 Thiomicrorhabdus aquaedulcis
190 1550268 1550573 - NZ_CP038241.1 Allofrancisella inopinata
191 235538 235843 + NZ_CP022375.1 Francisella opportunistica
192 3676989 3677294 - NC_015559.1 Marinomonas posidonica IVIA-Po-181
193 759863 760168 - NZ_CP021323.1 Kushneria konosiri
194 1085442 1085747 + NZ_CP046603.1 Lysobacter soli
195 1860730 1861035 + NZ_CP060731.1 Pseudoxanthomonas mexicana
196 1479054 1479359 - NZ_CP038017.1 Allofrancisella frigidaquae
197 1866004 1866309 - NZ_CP009238.1 Basilea psittacipulmonis DSM 24701
198 3297470 3297775 - NZ_CP064030.1 Dyella caseinilytica
199 2375923 2376228 - NZ_CP007446.1 Snodgrassella alvi wkB2
200 4082403 4082708 + NZ_CP043473.1 Chromobacterium paludis
201 4508693 4508998 - NC_005085.1 Chromobacterium violaceum ATCC 12472
202 428140 428445 + NZ_CP022132.1 Francisella halioticida
203 1445632 1445937 - NZ_CP011257.1 Ralstonia mannitolilytica
204 1572091 1572396 - NZ_CP012943.1 Ralstonia solanacearum
205 3529752 3530057 - NZ_CP068285.1 Ralstonia syzygii subsp. celebesensis
206 433204 433509 + NZ_AP019312.1 Chromobacterium haemolyticum
207 274284 274589 + NC_023029.1 Francisella orientalis LADL--07-285A
208 237704 238009 + NC_017449.1 Francisella hispaniensis
209 3922069 3922374 - NC_020908.1 Octadecabacter arcticus 238
210 931541 931846 + NZ_LR134378.1 Lautropia mirabilis
211 1120759 1121064 - NZ_CP022889.1 Tsuneonella mangrovi
212 327799 328104 + NC_012969.1 Methylovorus glucosetrophus SIP3-4
213 2023559 2023864 + NZ_CP040882.1 Sutterella faecalis
214 2684121 2684426 - NZ_CP041242.1 Lysobacter alkalisoli
215 181661 181966 + NZ_CP054624.1 Cupriavidus gilardii
216 1382290 1382589 - NZ_CP027231.1 Bacteroides zoogleoformans
217 235404 235709 + NZ_CP061941.1 Marinomonas algicola
218 243433 243738 + NC_015696.1 Francisella salina
219 1550269 1550574 - NZ_CP043552.1 Francisella marina
220 3440685 3440990 - NZ_CP047491.1 Microbulbifer hydrolyticus
221 2215048 2215353 + NZ_CP029495.1 Chromobacterium phragmitis
222 1577787 1578092 + NZ_CP039731.1 Aquitalea aquatilis
223 3957004 3957309 - NZ_CP047241.1 Aquitalea denitrificans
224 3571738 3572043 + NZ_CP017707.1 Chromobacterium vaccinii
225 1185370 1185675 - NZ_CP012505.1 Francisella persica ATCC VR-331
226 700152 700457 - NZ_CP059082.1 Halomonas titanicae
227 1362429 1362728 + NC_014933.1 Bacteroides helcogenes P 36-108
228 4306011 4306316 - NZ_CP061081.1 Marinomonas arctica
229 4681535 4681834 - NZ_LN877293.1 Bacteroides fragilis
230 2181090 2181395 - NZ_CP059569.1 Kingella oralis
231 739174 739479 + NC_017033.1 Frateuria aurantia DSM 6220
232 1772672 1772977 - NZ_CP070273.1 Marinomonas foliarum
233 600626 600931 + NZ_CP014864.1 Microbulbifer thermotolerans
234 1530080 1530379 - NZ_CP027234.1 Bacteroides heparinolyticus
235 2539333 2539638 + NZ_CP021358.1 Kushneria marisflavi
236 3296946 3297251 - NZ_CP012373.2 Beggiatoa leptomitoformis
237 5170737 5171042 - NZ_CP020038.1 Agarilytica rhodophyticola
238 3405494 3405793 - NZ_CP012938.1 Bacteroides ovatus
239 294230 294535 + NC_007947.1 Methylobacillus flagellatus KT
240 901969 902274 + NC_007614.1 Nitrosospira multiformis ATCC 25196
241 764927 765232 + NZ_CP023422.1 Janthinobacterium svalbardensis
242 4626612 4626917 + NZ_CP041185.1 Janthinobacterium tructae
243 726863 727168 + NZ_CP048832.1 Janthinobacterium lividum
244 3198902 3199207 + NZ_CP014476.1 Methylomonas denitrificans
245 512271 512576 + NZ_CP010427.1 Allofrancisella guangzhouensis
246 2134191 2134496 - NC_016026.1 Micavibrio aeruginosavorus ARL-13
247 2734845 2735150 - NZ_CP072793.1 Thiothrix unzii
248 2178095 2178394 - NZ_LR215980.1 Paraprevotella xylaniphila YIT 11841
249 3842755 3843054 - NZ_CP015401.2 Bacteroides caecimuris
250 257342 257647 + NZ_CP016796.1 Francisella uliginis
251 259730 260035 + NZ_CP012160.1 Octadecabacter temperatus
252 416078 416383 + NZ_CP025120.1 Kangiella profundi
253 1155123 1155428 + NZ_CP047385.1 Pandoraea fibrosis
254 207884 208189 - NZ_CP034179.1 Caenibius tardaugens NBRC 16725
255 6037361 6037666 - NZ_CP028324.1 Massilia armeniaca
256 3263789 3264094 + NZ_CP037953.1 Permianibacter aggregans
257 3511932 3512237 - NZ_CP019650.1 Microbulbifer agarilyticus
258 1465128 1465433 + NZ_CP011310.1 Aurantiacibacter atlanticus
259 1204512 1204817 + NZ_CP011971.1 Steroidobacter denitrificans
260 2064026 2064331 - NZ_CP025430.1 Paracoccus zhejiangensis
261 252607 252912 + NZ_CP011568.3 Pandoraea thiooxydans
262 838044 838352 + NZ_LR134365.1 Cardiobacterium hominis
263 2427614 2427919 - NZ_AP017372.2 Halorhodospira halochloris
264 3530960 3531265 - NZ_CP032519.1 Cupriavidus oxalaticus
265 3744253 3744558 - NZ_CP039287.1 Cupriavidus necator H16
266 2268584 2268889 - NZ_CP053921.1 Erythrobacter mangrovi
267 2987255 2987560 - NZ_CP009795.1 Burkholderia dolosa AU0158
268 337821 338126 + NZ_CP013398.1 Burkholderia seminalis
269 322959 323264 + NZ_CP013401.1 Burkholderia metallica
270 1624785 1625090 + NZ_CP011503.1 Burkholderia pyrrocinia
271 335312 335617 + NZ_CP013450.1 Burkholderia cenocepacia
272 460000 460305 + NZ_CP033040.1 Thiomicrorhabdus indica
273 4210828 4211133 - NZ_CP011131.1 Lysobacter gummosus
274 2140976 2141281 - NZ_AP018560.1 Aerosticca soli
275 58560 58865 + NZ_CP023276.1 Polynucleobacter difficilis
276 153705 154010 + NZ_CP021781.1 Francisella adeliensis
277 522871 523176 + NZ_CP046570.1 Xanthomonas albilineans
278 331337 331642 + NZ_CP045235.1 Burkholderia cepacia
279 328687 328992 + NC_007510.1 Burkholderia lata
280 2546908 2547213 - NC_002977.6 Methylococcus capsulatus str. Bath
281 2315256 2315555 - NC_015164.1 Phocaeicola salanitronis DSM 18170
282 1390102 1390407 + NZ_CP021106.3 Nitrosospira lacus
283 1599934 1600239 + NZ_CP020612.1 Paracoccus contaminans
284 818824 819129 - NZ_CP043476.1 Xanthomonas hyacinthi
285 3509298 3509603 - NZ_CP036422.1 Halioglobus maricola
286 1444290 1444595 - NZ_CP012023.1 Celeribacter marinus
287 1658040 1658345 - NC_022664.1 Spiribacter curvatus
288 265304 265606 + NZ_CP013195.1 Prevotella enoeca
289 855863 856168 - NZ_CP015093.1 Salipiger abyssi
290 1321146 1321451 + NZ_CP016591.1 Tsuneonella dongtanensis
291 385019 385324 + NZ_AP020335.1 Hydrogenovibrio marinus
292 3242888 3243193 - NZ_CP065915.1 Pelagovum pacificum
293 621728 622033 + NZ_CP004387.1 Alcanivorax pacificus W11-5
294 2020918 2021223 + NC_011894.1 Methylobacterium nodulans ORS 2060
295 2972534 2972839 - NZ_CP021404.1 Pacificitalea manganoxidans
296 542927 543232 + NC_004556.1 Xylella fastidiosa Temecula1
297 926745 927050 + NZ_CP034348.1 Roseovarius faecimaris
298 981871 982176 + NZ_CP040517.1 Luteithermobacter gelatinilyticus
299 1389036 1389341 - NZ_CP034464.1 Undibacterium parvum
300 2395530 2395835 - NZ_AP021889.1 Thiosulfatimonas sediminis
301 3198761 3199066 + NZ_CP009291.1 Novosphingobium pentaromativorans US6-1
302 778539 778844 + NZ_CP054599.1 Sulfitobacter pseudonitzschiae
303 1084739 1085044 + NZ_CP041335.1 Chitinolyticbacter meiyuanensis
304 2437494 2437799 - NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
305 3754303 3754608 - NZ_CP008849.1 Alteromonas australica
306 674752 675051 - NZ_CP040530.1 Bacteroides thetaiotaomicron
307 2549405 2549710 - NZ_CP003984.1 Planktomarina temperata RCA23
308 726302 726607 + NC_016041.1 Glaciecola nitratireducens FR1064
309 2271226 2271531 + NZ_CP060820.1 Lysobacter solisilvae (ex Woo and Kim 2020)
310 3392104 3392409 - NZ_AP014936.1 Sulfurifustis variabilis
311 4417502 4417807 - NZ_CP023465.1 Lysobacter capsici
312 1237266 1237571 - NZ_CP037948.1 Qipengyuania sediminis
313 3700349 3700654 - NZ_CP019437.1 Thioclava nitratireducens
314 3830216 3830521 - NZ_CP053562.1 Thioclava electrotropha
315 805667 805972 + NZ_CP070503.1 Pseudomonas atacamensis
316 2868264 2868569 - NZ_CP014262.1 Pseudomonas corrugata
317 6010124 6010429 - NZ_CP035088.1 Pseudomonas viciae
318 4902524 4902829 + NZ_CP048810.1 Pseudomonas bijieensis
319 6057731 6058036 - NZ_CP034725.1 Pseudomonas brassicacearum
320 347411 347716 + NZ_AP012273.1 Thiolapillus brandeum
321 998292 998597 - NZ_CP072425.1 Pseudoalteromonas viridis
322 111309 111614 + NZ_CP011039.1 Pseudoalteromonas spongiae UST010723-006
323 829882 830187 + NZ_CP009888.1 Pseudoalteromonas piratica
324 2916396 2916701 - NZ_CP041159.1 Leisingera aquaemixtae
325 507621 507926 + NZ_CP011367.1 Thioalkalivibrio versutus
326 297420 297689 + NC_015875.1 Streptococcus pseudopneumoniae IS7493
327 3454196 3454501 - NZ_CP011028.1 Pseudoalteromonas espejiana DSM 9414
328 272046 272351 + NZ_CP071325.1 Photobacterium ganghwense
329 5306561 5306866 - NZ_HG322949.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
330 3421410 3421715 + NZ_CP045302.1 Azotobacter salinestris
331 1675486 1675791 + NZ_CP023449.1 Rhizorhabdus dicambivorans
332 3954862 3955167 - NZ_CP011835.1 Azotobacter chroococcum
333 3328803 3329108 - NZ_CP029185.2 Limnobaculum parvum
334 4141666 4141971 - NZ_CP034752.1 Jinshanibacter zhutongyuii
335 310771 311076 + NZ_LR134531.1 Pragia fontium
336 2977973 2978278 - NZ_AP017928.1 Methylocaldum marinum
337 2396211 2396516 - NZ_AP018725.1 Sulfuriflexus mobilis
338 3086885 3087190 - NZ_CP007029.1 Thioalkalivibrio paradoxus ARh 1
339 2010168 2010473 - NZ_CP061538.1 Rothia amarae
340 3608496 3608801 - NZ_CP034148.1 Pantoea agglomerans
341 462793 463098 + NZ_CP045720.1 Pantoea eucalypti
342 472899 473204 + NZ_CP038853.1 Pantoea vagans
343 696366 696671 + NZ_AP021884.1 Sulfuriferula plumbiphila
344 375112 375417 + NZ_LS483470.1 Leminorella richardii
345 5639095 5639400 - NZ_CP029608.1 Pseudomonas kribbensis
346 5855244 5855549 - NZ_CP062252.1 Pseudomonas allokribbensis
347 6117218 6117523 - NZ_CP061079.1 Pseudomonas chlororaphis
348 6149290 6149595 - NZ_LS999205.1 Pseudomonas protegens CHA0
349 1111331 1111600 + NZ_CP047361.1 Macrococcus canis
350 2972323 2972628 - NZ_CP016033.1 Erythrobacter neustonensis
351 1494594 1494899 - NC_009511.1 Sphingomonas wittichii RW1
352 6004195 6004500 - NZ_CP014205.2 Pseudomonas glycinae
353 5845744 5846049 - NZ_CP062253.1 Pseudomonas gozinkensis
354 451557 451862 + NZ_CP035033.1 Hydrogenovibrio thermophilus
355 3822386 3822691 - NZ_CP012621.1 Zobellella denitrificans
356 1183505 1183810 - NZ_CP019706.1 Pantoea alhagi
357 2444187 2444492 - NZ_CP049115.1 Pantoea stewartii
358 461494 461799 + NC_017554.1 Pantoea ananatis PA13
359 407356 407661 + NZ_CP061511.1 Mixta calida
360 481974 482279 + NZ_CP026377.1 Mixta gaviniae
361 4230938 4231243 + NZ_CP028271.1 Mixta intestinalis
362 3966283 3966579 - NZ_CP034550.1 Saccharothrix syringae
363 601104 601373 - NZ_CP065729.1 Macrococcus caseolyticus
364 21373 21678 + NZ_CP016180.1 Pasteurella skyensis
365 3219073 3219342 - NZ_CP054012.1 Parabacteroides distasonis
366 2215058 2215363 - NC_012982.1 Hirschia baltica ATCC 49814
367 2758707 2759012 - NZ_LN832559.1 Paracoccus aminovorans
368 3079304 3079609 + NZ_CP022196.1 Celeribacter ethanolicus
369 2445046 2445351 + NZ_CP015163.1 Amycolatopsis albispora
370 613970 614275 + NZ_CP024645.1 Rhizobacter gummiphilus
371 3584116 3584421 - NZ_CP036536.1 Salinimonas lutimaris
372 441734 442039 + NZ_CP054020.1 Thiomicrorhabdus xiamenensis
373 4087785 4088090 - NZ_CP014322.1 Alteromonas addita
374 4296998 4297303 - NC_015554.1 Alteromonas naphthalenivorans
375 2475354 2475659 + NZ_CP021376.1 Oceanisphaera avium
376 2450391 2450660 - NC_010803.1 Chlorobium limicola DSM 245
377 410109 410414 + NZ_CP035129.1 Kosakonia cowanii
378 2691163 2691468 - NZ_CP016337.1 Kosakonia sacchari
379 4441224 4441529 - NZ_CP063425.1 Kosakonia pseudosacchari
380 3563391 3563696 + NZ_CP045300.1 Kosakonia arachidis
381 455730 456035 + NZ_CP014007.2 Kosakonia oryzae
382 4868205 4868510 - NZ_CP015113.1 Kosakonia radicincitans
383 315754 316059 - NZ_CP029642.1 Arthrobacter dokdonellae
384 1764332 1764637 + NZ_CP022745.1 Sphingobium xenophagum
385 2057682 2057951 - NC_002932.3 Chlorobaculum tepidum TLS
386 68894 69199 - NZ_LT907988.1 Orrella dioscoreae
387 3587053 3587358 - NZ_CP040449.1 Aeromonas simiae
388 668203 668508 + NZ_CP004393.1 Celeribacter indicus
389 5318149 5318454 - NZ_CP068034.2 Pseudomonas syringae
390 5396335 5396640 - NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
391 697785 698090 + NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
392 456899 457204 + NC_012880.1 Musicola paradisiaca Ech703
393 1225353 1225622 + NZ_CP054482.1 Macrococcus bohemicus
394 612611 612916 + NZ_CP005974.1 Photobacterium gaetbulicola Gung47
395 74253 74558 + NZ_CP011452.2 Croceibacterium atlanticum
396 116470 116775 + NZ_CP006944.1 Mannheimia varigena USDA-ARS-USMARC-1312
397 3927523 3927828 - NZ_CP046670.1 Alteromonas mediterranea
398 292052 292357 + NC_009952.1 Dinoroseobacter shibae DFL 12 = DSM 16493
399 2810389 2810694 + NZ_CP052766.1 Alteromonas pelagimontana
400 1269111 1269416 + NZ_CP017057.1 Erythrobacter litoralis
401 608785 609090 + NZ_CP048788.1 Roseobacter ponti
402 5660775 5661080 + NZ_CP009365.1 Pseudomonas soli
403 949598 949903 + NZ_CP024899.1 Rhodobaca barguzinensis
404 1325967 1326272 + NZ_CP016545.1 Paraurantiacibacter namhicola
405 2089803 2090108 - NZ_CP056080.1 Rothia nasimurium
406 413537 413842 - NZ_CP012109.1 Myxococcus hansupus
407 2241901 2242170 - NC_011059.1 Prosthecochloris aestuarii DSM 271
408 2193207 2193512 - NZ_AP019389.1 Qipengyuania flava
409 2213404 2213709 - NZ_LR134479.1 Rothia aeria
410 238193 238462 - NC_018178.1 Melioribacter roseus P3M-2
411 1674364 1674633 + NZ_CP042831.1 Flavobacterium alkalisoli
412 378201 378506 + NZ_CP061527.1 Shigella dysenteriae
413 3949768 3950073 - NZ_LR134340.1 Escherichia marmotae
414 2367870 2368175 - NZ_CP057657.1 Escherichia fergusonii
415 3430962 3431267 - NC_004337.2 Shigella flexneri 2a str. 301
416 3446579 3446884 - NC_000913.3 Escherichia coli str. K-12 substr. MG1655
417 3422586 3422891 - NZ_AP014857.1 Escherichia albertii
418 4181719 4182024 - NC_002695.2 Escherichia coli O157:H7 str. Sakai
419 87728 88033 - NZ_CP020083.1 Blastomonas fulva
420 649901 650206 + NC_014006.1 Sphingobium japonicum UT26S
421 2130294 2130599 - NZ_AP017655.1 Sphingobium cloacae
422 2533450 2533755 - NZ_CP060035.1 Sphingobium fuliginis
423 495578 495883 + NZ_CP017689.1 Thalassotalea crassostreae
424 1309508 1309813 + NZ_CP004388.1 Thalassospira xiamenensis M-5 = DSM 17429
425 3469952 3470221 - NZ_CP010817.1 Myroides profundi
426 368249 368554 + NZ_CP040602.1 Thiomicrorhabdus sediminis
427 1444120 1444425 - NZ_CP020538.1 Sphingobium herbicidovorans
428 4196285 4196590 - NC_018691.1 Alcanivorax dieselolei B5
429 614271 614576 + NZ_CP022562.1 Pseudomonas monteilii
430 582353 582658 + NC_021505.1 Pseudomonas putida NBRC 14164
431 109821 110126 - NZ_CP072844.1 Psychrosphaera aestuarii
432 582820 583125 + NZ_AP021888.1 Thiosulfativibrio zosterae
433 2109327 2109632 - NZ_CP061539.1 Rothia terrae
434 469339 469644 + NZ_CP010855.1 Marinovum algicola DG 898
435 4176464 4176769 + NZ_CP009533.1 Pseudomonas rhizosphaerae
436 1384191 1384496 + NZ_CP015963.1 Altererythrobacter ishigakiensis
437 193839 194108 - NZ_CP017479.1 Flavobacterium gilvum
438 2077646 2077915 - NC_010729.1 Porphyromonas gingivalis ATCC 33277
439 4763568 4763873 + NC_013716.1 Citrobacter rodentium ICC168
440 1162514 1162819 + NZ_CP016268.1 Woeseia oceani
441 165132 165401 - NZ_CP029187.1 Flavobacterium pallidum
442 315279 315584 + NC_014541.1 Ferrimonas balearica DSM 9799
443 121124 121429 + NZ_CP016605.1 Bisgaardia hudsonensis
444 1696578 1696847 - NZ_CP040812.1 Antarcticibacterium flavum
445 524572 524877 + NC_006526.2 Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
446 109923 110228 + NZ_CP015581.1 Tatumella citrea
447 2671923 2672192 - NZ_CP017305.1 Chlorobaculum limnaeum
448 3265237 3265542 + NZ_CP018221.1 Tardibacter chloracetimidivorans
449 394053 394358 + NZ_CP054058.1 Scandinavium goeteborgense
450 229405 229710 - NZ_CP024920.1 Qipengyuania seohaensis
451 2906172 2906477 - NZ_CP031146.1 Pseudomonas plecoglossicida
452 3816128 3816433 - NZ_CP031769.1 Salinimonas sediminis
453 970025 970330 - NZ_CP014056.2 Grimontia hollisae
454 2432531 2432800 + NZ_CP016907.1 Flavobacterium anhuiense
455 2351311 2351580 + NZ_CP043612.1 Flavobacterium nitrogenifigens
456 408754 409023 - NZ_CP029255.1 Flavobacterium crocinum
457 401192 401461 - NC_009441.1 Flavobacterium johnsoniae UW101
458 2651977 2652282 - NC_019902.2 Thioalkalivibrio nitratireducens DSM 14787
459 93822 94127 - NC_016025.1 Chloracidobacterium thermophilum B
460 6018080 6018349 + NC_015510.1 Haliscomenobacter hydrossis DSM 1100
461 1113444 1113749 - NZ_CP065640.1 Serratia rubidaea
462 2966340 2966645 - NC_008048.1 Sphingopyxis alaskensis RB2256
463 4164679 4164948 - NC_014041.1 Zunongwangia profunda SM-A87
464 534580 534885 + NZ_CP011805.1 Pelagerythrobacter marensis
465 1659248 1659553 + NZ_LT556085.1 Citrobacter amalonaticus
466 23012 23317 - NZ_CP045205.1 Citrobacter telavivensis
467 3192683 3192988 - NZ_CP042906.1 Hypericibacter terrae
468 595950 596219 - NZ_CP031188.1 Flavobacterium arcticum
469 1154509 1154814 - NZ_CP039964.1 Pseudorhodobacter turbinis
470 1667042 1667347 - NZ_CP034328.1 Tabrizicola piscis
471 1613463 1613768 - NZ_CP022208.1 Rhodococcus pyridinivorans
472 395649 395954 + NZ_CP035504.1 Kocuria indica
473 463402 463707 + NZ_CP045845.1 Kluyvera intermedia
474 3832351 3832656 + NZ_CP038469.1 Citrobacter tructae
475 2833966 2834271 + NZ_CP044098.1 Citrobacter portucalensis
476 2248602 2248907 - NZ_CP033744.1 Citrobacter freundii
477 4344948 4345253 - NC_009792.1 Citrobacter koseri ATCC BAA-895
478 7777159 7777464 + NZ_CP022203.1 Corallococcus macrosporus DSM 14697
479 259398 259667 - NZ_CP029186.1 Flavobacterium album
480 2094797 2095102 + NZ_CP042582.1 Hypericibacter adhaerens
481 1180649 1180918 + NZ_CP017688.1 Flavobacterium crassostreae
482 1727825 1728094 + NZ_CP020918.1 Flavobacterium faecale
483 662053 662349 - NC_019673.1 Saccharothrix espanaensis DSM 44229
484 589591 589896 + NZ_CP070624.1 Photobacterium damselae subsp. damselae
485 4890174 4890479 + NZ_CP009429.1 Sphingopyxis macrogoltabida
486 2420581 2420886 - NZ_CP031357.1 Erythrobacter aureus
487 865013 865282 - NZ_CP054494.1 Flavobacterium columnare
488 196216 196485 + NC_011027.1 Chlorobaculum parvum NCIB 8327
489 2988856 2989125 - NC_016001.1 Flavobacterium branchiophilum FL-15
490 1348047 1348316 + NZ_CP038810.1 Flavobacterium sangjuense
491 409448 409753 + NZ_CP014782.1 Shewanella psychrophila
492 2937560 2937829 - NC_008571.1 Gramella forsetii KT0803
493 2005089 2005358 + NZ_CP020919.1 Flavobacterium kingsejongi
494 428284 428562 - NC_015501.1 Porphyromonas asaccharolytica DSM 20707
495 2776318 2776587 - NZ_LT906459.1 Odoribacter splanchnicus
496 1425766 1426071 + NC_011144.1 Phenylobacterium zucineum HLK1
497 185600 185905 + NC_009092.1 Shewanella loihica PV-4
498 3492243 3492548 - NZ_CP013254.1 Kocuria flava
499 2805361 2805630 + NZ_CP018153.1 Gramella salexigens
500 1309528 1309833 + NZ_CP024199.1 Thalassospira marina
501 641073 641378 + NZ_CP025682.1 Azoarcus pumilus
502 173617 173886 - NZ_CP028811.1 Flavobacterium magnum
503 131731 132018 + NZ_AP019846.1 Leptotrichia hongkongensis
504 249989 250276 + NC_013192.1 Leptotrichia buccalis C-1013-b
505 3063144 3063413 + NC_019793.1 Deinococcus peraridilitoris DSM 19664
506 5030545 5030850 - NZ_CP017147.1 Bosea vaviloviae
507 174293 174598 + NZ_CP022272.1 Shewanella marisflavi
508 4417713 4418018 + NZ_CP009122.1 Sphingopyxis fribergensis
509 3553076 3553345 - NC_017770.1 Solitalea canadensis DSM 3403
510 3225016 3225285 + NZ_CP042476.1 Antarcticibacterium arcticum
511 1516220 1516525 - NC_021291.1 Spiribacter salinus M19-40
512 417531 417800 - NZ_CP028136.1 Gramella fulva
513 3421736 3422041 + NZ_CP041783.1 Shewanella donghaensis
514 4748283 4748588 - NC_014012.1 Shewanella violacea DSS12
515 1500638 1500907 + NZ_CP006828.1 Ornithobacterium rhinotracheale ORT-UMN 88
516 1991683 1991988 + NC_015673.1 Corynebacterium resistens DSM 45100
517 4740256 4740561 - NZ_CP020472.1 Shewanella japonica
518 5278169 5278474 - NC_009831.1 Shewanella sediminis HAW-EB3
519 706951 707220 - NC_014934.1 Cellulophaga algicola DSM 14237
520 519452 519739 + NZ_CP068114.1 Fusobacterium canifelinum
521 431768 432055 + NZ_LN831027.1 Fusobacterium nucleatum subsp. polymorphum
522 2214834 2215139 + NZ_CP058952.1 Chitinibacter fontanus
523 2128204 2128491 - NZ_AP019829.2 Leptotrichia wadei
524 1679015 1679302 + NZ_CP024699.1 Fusobacterium pseudoperiodonticum
525 667070 667339 + NC_017025.1 Flavobacterium indicum GPTSA100-9 = DSM 17447
526 1304959 1305264 + NC_007794.1 Novosphingobium aromaticivorans DSM 12444
527 571085 571372 + NZ_CP013336.1 Fusobacterium hwasookii ChDC F206
528 2348793 2349098 + NZ_CP019448.1 Simonsiella muelleri ATCC 29453
529 4011776 4012081 - NZ_CP037951.1 Parashewanella tropica
530 245805 246074 - NZ_CP009976.1 Cellulophaga baltica 18
531 908910 909215 - NZ_LS483459.1 Corynebacterium jeikeium
532 3076634 3076939 - NZ_CP042345.1 Novosphingobium ginsenosidimutans
533 2623165 2623470 - NZ_LS483468.1 Rhodococcus coprophilus
534 2158587 2158892 - NZ_CP060783.1 Diaphorobacter aerolatus
535 112720 113025 + NZ_CP038018.1 Eikenella exigua
536 1222543 1222848 + NZ_LT906482.1 Eikenella corrodens
537 1086281 1086550 + NZ_AP014564.1 Ichthyobacterium seriolicida
538 1013775 1014080 - NZ_CP046908.1 Stappia indica
539 234793 235080 - NZ_CP028107.1 Fusobacterium necrophorum subsp. funduliforme
540 934246 934551 - NZ_CP031325.1 Neisseria polysaccharea
541 1057044 1057349 + NZ_CP012028.1 Neisseria gonorrhoeae
542 3600406 3600711 - NZ_CP047180.1 Rathayibacter festucae
543 2839330 2839635 - NZ_CP047186.1 Rathayibacter tanaceti
544 4887205 4887510 - NZ_CP071839.1 Streptomyces cyanogenus
545 2867157 2867462 - NZ_CP029843.1 Lysobacter maris
546 1367022 1367327 + NZ_LR134533.1 Neisseria weaveri
547 576347 576652 + NZ_CP059564.1 Alysiella filiformis
548 1724679 1724984 - NZ_CP021520.1 Neisseria meningitidis
549 357028 357333 + NZ_CP015515.1 Rathayibacter tritici
550 286729 287034 - NZ_CP059563.1 Conchiformibius steedae
551 481269 481574 - NZ_CP060780.1 Sphingomonas daechungensis
552 1905249 1905554 + NZ_CP031555.1 Thalassospira indica
553 1847108 1847413 + NC_015259.1 Polymorphum gilvum SL003B-26A1
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_AP018558.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00831.25 0.82 452 1635 same-strand Ribosomal L29 protein
2 PF00366.22 0.84 463 1363.0 same-strand Ribosomal protein S17
3 PF00238.21 0.89 492 895 same-strand Ribosomal protein L14p/L23e
4 PF17136.6 0.88 487 568.0 same-strand Ribosomal proteins 50S L24/mitochondrial 39S L24
5 PF00467.31 0.68 376 569 same-strand KOW motif
6 PF00673.23 0.9 499 12.0 same-strand ribosomal L5P family C-terminus
7 PF00281.21 0.9 499 12.0 same-strand Ribosomal protein L5
8 PF00410.21 0.9 498 19 same-strand Ribosomal protein S8
9 PF00347.25 0.9 499 433 same-strand Ribosomal protein L6
10 PF00861.24 0.87 481 975.0 same-strand Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
11 PF03719.17 0.9 499 1350.0 same-strand Ribosomal protein S5, C-terminal domain
12 PF00333.22 0.9 499 1350.0 same-strand Ribosomal protein S5, N-terminal domain
13 PF00327.22 0.87 479 1886.0 same-strand Ribosomal protein L30p/L7e
++ More..